feat(matlab): windowed paper-LME replication for mergeNaive (d0_10, d0_13)
Make tdcs_paper_lme window-aware (windowKey 'full'|'d0_10'|'d0_13', default 'full' -> unchanged filename). Windowed runs give the two anchor arms equal day coverage, so the stim:day interaction is not confounded by the full-range coverage imbalance; the report now states whether coverage is equal and adds an INTERPRETATION block. Add switch cases paper_mergeNaive_d0_10 / _d0_13 and include them in run_all. Finding: unlike mergeA2 (fair-window interaction n.s.), the pooled-naive control keeps the interaction significant in the fair d0_13 window (F(1)=7.07, p=0.0088, +1.80 [+0.46,+3.14]; equal on Day 1 p=0.20), reproducing the paper without the coverage confound; d0_10 is borderline (p=0.051). Tests: tLme asserts equal coverage / no warning / one full summary for both windows and a significant positive d0_13 interaction; bad windowKey errors. Suite 41/41. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
This commit is contained in:
Experiments DB Dev
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subject,group,day,success,total,day_c,day_c2
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Banh-mi-1,Electrode-Box-B2,0,13,84,-4.92063492063492,24.2126480221718
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Banh-mi-1,Electrode-Box-B2,1,35,86,-3.92063492063492,15.371378180902
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Banh-mi-1,Electrode-Box-B2,2,47,110,-2.92063492063492,8.53010833963215
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Banh-mi-1,Electrode-Box-B2,3,65,140,-1.92063492063492,3.68883849836231
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Banh-mi-1,Electrode-Box-B2,4,70,127,-0.920634920634921,0.847568657092467
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Banh-mi-1,Electrode-Box-B2,5,102,142,0.0793650793650791,0.0062988158226253
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Banh-mi-1,Electrode-Box-B2,6,90,131,1.07936507936508,1.16502897455278
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Banh-mi-1,Electrode-Box-B2,7,109,148,2.07936507936508,4.32375913328294
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Banh-mi-1,Electrode-Box-B2,8,104,137,3.07936507936508,9.4824892920131
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Banh-mi-1,Electrode-Box-B2,9,119,150,4.07936507936508,16.6412194507433
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Banh-mi-1,Electrode-Box-B2,10,121,158,5.07936507936508,25.7999496094734
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Banh-mi-2,Electrode-Box-A2,0,25,97,-4.92063492063492,24.2126480221718
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Banh-mi-2,Electrode-Box-A2,1,22,101,-3.92063492063492,15.371378180902
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Banh-mi-2,Electrode-Box-A2,2,22,119,-2.92063492063492,8.53010833963215
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Banh-mi-2,Electrode-Box-A2,3,29,118,-1.92063492063492,3.68883849836231
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Banh-mi-2,Electrode-Box-A2,4,27,136,-0.920634920634921,0.847568657092467
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Banh-mi-2,Electrode-Box-A2,5,43,146,0.0793650793650791,0.0062988158226253
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Banh-mi-2,Electrode-Box-A2,6,74,146,1.07936507936508,1.16502897455278
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Banh-mi-2,Electrode-Box-A2,7,70,148,2.07936507936508,4.32375913328294
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Banh-mi-2,Electrode-Box-A2,8,65,130,3.07936507936508,9.4824892920131
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Banh-mi-2,Electrode-Box-A2,9,79,151,4.07936507936508,16.6412194507433
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Banh-mi-2,Electrode-Box-A2,10,93,152,5.07936507936508,25.7999496094734
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Egg-tart-1,Electrode-Box-B2,0,7,56,-4.92063492063492,24.2126480221718
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Egg-tart-1,Electrode-Box-B2,1,16,78,-3.92063492063492,15.371378180902
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Egg-tart-1,Electrode-Box-B2,2,23,103,-2.92063492063492,8.53010833963215
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Egg-tart-1,Electrode-Box-B2,3,63,120,-1.92063492063492,3.68883849836231
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Egg-tart-1,Electrode-Box-B2,4,69,132,-0.920634920634921,0.847568657092467
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Egg-tart-1,Electrode-Box-B2,5,83,136,0.0793650793650791,0.0062988158226253
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Egg-tart-1,Electrode-Box-B2,6,71,142,1.07936507936508,1.16502897455278
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Egg-tart-1,Electrode-Box-B2,7,79,138,2.07936507936508,4.32375913328294
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Egg-tart-1,Electrode-Box-B2,8,98,142,3.07936507936508,9.4824892920131
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Egg-tart-1,Electrode-Box-B2,9,89,139,4.07936507936508,16.6412194507433
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Egg-tart-1,Electrode-Box-B2,10,96,143,5.07936507936508,25.7999496094734
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Egg-tart-2,Electrode-Box-A2,1,2,38,-3.92063492063492,15.371378180902
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Egg-tart-2,Electrode-Box-A2,4,54,131,-0.920634920634921,0.847568657092467
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Egg-tart-2,Electrode-Box-A2,5,84,139,0.0793650793650791,0.0062988158226253
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Egg-tart-2,Electrode-Box-A2,6,85,145,1.07936507936508,1.16502897455278
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Egg-tart-2,Electrode-Box-A2,7,79,143,2.07936507936508,4.32375913328294
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Egg-tart-2,Electrode-Box-A2,8,76,131,3.07936507936508,9.4824892920131
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Egg-tart-2,Electrode-Box-A2,9,88,149,4.07936507936508,16.6412194507433
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Egg-tart-2,Electrode-Box-A2,10,81,151,5.07936507936508,25.7999496094734
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Khoai-lang-1,Electrode-Box-B2,0,3,69,-4.92063492063492,24.2126480221718
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Khoai-lang-1,Electrode-Box-B2,1,18,97,-3.92063492063492,15.371378180902
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Khoai-lang-1,Electrode-Box-B2,2,27,84,-2.92063492063492,8.53010833963215
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Khoai-lang-1,Electrode-Box-B2,3,46,121,-1.92063492063492,3.68883849836231
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Khoai-lang-1,Electrode-Box-B2,4,65,143,-0.920634920634921,0.847568657092467
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Khoai-lang-1,Electrode-Box-B2,5,76,141,0.0793650793650791,0.0062988158226253
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Khoai-lang-1,Electrode-Box-B2,6,79,146,1.07936507936508,1.16502897455278
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Khoai-lang-1,Electrode-Box-B2,7,81,153,2.07936507936508,4.32375913328294
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Khoai-lang-1,Electrode-Box-B2,8,98,144,3.07936507936508,9.4824892920131
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Khoai-lang-1,Electrode-Box-B2,9,101,149,4.07936507936508,16.6412194507433
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Khoai-lang-1,Electrode-Box-B2,10,103,150,5.07936507936508,25.7999496094734
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Khoai-lang-2,Electrode-Box-A2,0,0,0,-4.92063492063492,24.2126480221718
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Khoai-lang-2,Electrode-Box-A2,1,0,0,-3.92063492063492,15.371378180902
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Khoai-lang-2,Electrode-Box-A2,2,10,47,-2.92063492063492,8.53010833963215
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Khoai-lang-2,Electrode-Box-A2,3,11,52,-1.92063492063492,3.68883849836231
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Khoai-lang-2,Electrode-Box-A2,4,9,56,-0.920634920634921,0.847568657092467
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Khoai-lang-2,Electrode-Box-A2,5,34,95,0.0793650793650791,0.0062988158226253
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Khoai-lang-2,Electrode-Box-A2,6,21,72,1.07936507936508,1.16502897455278
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Khoai-lang-2,Electrode-Box-A2,7,23,99,2.07936507936508,4.32375913328294
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Khoai-lang-2,Electrode-Box-A2,8,64,136,3.07936507936508,9.4824892920131
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Khoai-lang-2,Electrode-Box-A2,9,75,131,4.07936507936508,16.6412194507433
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Khoai-lang-2,Electrode-Box-A2,10,63,134,5.07936507936508,25.7999496094734
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Khoai-tay-1,Electrode-Box-A,0,14,62,-4.92063492063492,24.2126480221718
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Khoai-tay-1,Electrode-Box-A,1,22,83,-3.92063492063492,15.371378180902
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Khoai-tay-1,Electrode-Box-A,2,6,79,-2.92063492063492,8.53010833963215
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Khoai-tay-1,Electrode-Box-A,3,28,97,-1.92063492063492,3.68883849836231
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Khoai-tay-1,Electrode-Box-A,4,60,134,-0.920634920634921,0.847568657092467
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Khoai-tay-1,Electrode-Box-A,5,75,138,0.0793650793650791,0.0062988158226253
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Khoai-tay-1,Electrode-Box-A,6,81,137,1.07936507936508,1.16502897455278
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Khoai-tay-1,Electrode-Box-A,7,78,147,2.07936507936508,4.32375913328294
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Khoai-tay-1,Electrode-Box-A,8,91,132,3.07936507936508,9.4824892920131
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Khoai-tay-1,Electrode-Box-A,9,99,146,4.07936507936508,16.6412194507433
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Khoai-tay-1,Electrode-Box-A,10,94,143,5.07936507936508,25.7999496094734
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Khoai-tay-2,Electrode-Box-A2,1,21,68,-3.92063492063492,15.371378180902
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Khoai-tay-2,Electrode-Box-A2,2,6,79,-2.92063492063492,8.53010833963215
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Khoai-tay-2,Electrode-Box-A2,3,0,83,-1.92063492063492,3.68883849836231
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Khoai-tay-2,Electrode-Box-A2,4,28,87,-0.920634920634921,0.847568657092467
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Khoai-tay-2,Electrode-Box-A2,5,31,125,0.0793650793650791,0.0062988158226253
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Khoai-tay-2,Electrode-Box-A2,6,62,144,1.07936507936508,1.16502897455278
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Khoai-tay-2,Electrode-Box-A2,7,87,141,2.07936507936508,4.32375913328294
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Khoai-tay-2,Electrode-Box-A2,8,105,152,3.07936507936508,9.4824892920131
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Khoai-tay-2,Electrode-Box-A2,9,75,148,4.07936507936508,16.6412194507433
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Khoai-tay-2,Electrode-Box-A2,10,101,149,5.07936507936508,25.7999496094734
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OM-2,Electrode-Box-A2,0,1,7,-4.92063492063492,24.2126480221718
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OM-2,Electrode-Box-A2,1,11,33,-3.92063492063492,15.371378180902
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OM-2,Electrode-Box-A2,2,19,62,-2.92063492063492,8.53010833963215
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OM-2,Electrode-Box-A2,3,29,117,-1.92063492063492,3.68883849836231
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OM-2,Electrode-Box-A2,4,73,126,-0.920634920634921,0.847568657092467
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OM-2,Electrode-Box-A2,5,53,135,0.0793650793650791,0.0062988158226253
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OM-2,Electrode-Box-A2,6,73,138,1.07936507936508,1.16502897455278
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OM-2,Electrode-Box-A2,7,80,131,2.07936507936508,4.32375913328294
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OM-2,Electrode-Box-A2,8,91,141,3.07936507936508,9.4824892920131
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OM-2,Electrode-Box-A2,9,90,135,4.07936507936508,16.6412194507433
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OM-2,Electrode-Box-A2,10,95,142,5.07936507936508,25.7999496094734
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Root-beer-1,Electrode-Box-B2,0,11,85,-4.92063492063492,24.2126480221718
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Root-beer-1,Electrode-Box-B2,1,18,76,-3.92063492063492,15.371378180902
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Root-beer-1,Electrode-Box-B2,2,40,105,-2.92063492063492,8.53010833963215
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Root-beer-1,Electrode-Box-B2,3,55,134,-1.92063492063492,3.68883849836231
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Root-beer-1,Electrode-Box-B2,4,75,136,-0.920634920634921,0.847568657092467
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Root-beer-1,Electrode-Box-B2,5,64,133,0.0793650793650791,0.0062988158226253
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Root-beer-1,Electrode-Box-B2,6,104,139,1.07936507936508,1.16502897455278
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Root-beer-1,Electrode-Box-B2,7,98,148,2.07936507936508,4.32375913328294
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Root-beer-1,Electrode-Box-B2,8,81,145,3.07936507936508,9.4824892920131
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Root-beer-1,Electrode-Box-B2,9,89,156,4.07936507936508,16.6412194507433
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Root-beer-1,Electrode-Box-B2,10,105,158,5.07936507936508,25.7999496094734
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Root-beer-2,Electrode-Box-A2,0,22,74,-4.92063492063492,24.2126480221718
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Root-beer-2,Electrode-Box-A2,1,31,87,-3.92063492063492,15.371378180902
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Root-beer-2,Electrode-Box-A2,2,49,134,-2.92063492063492,8.53010833963215
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Root-beer-2,Electrode-Box-A2,3,31,89,-1.92063492063492,3.68883849836231
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Root-beer-2,Electrode-Box-A2,4,60,140,-0.920634920634921,0.847568657092467
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Root-beer-2,Electrode-Box-A2,5,84,147,0.0793650793650791,0.0062988158226253
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Vu-vuong,Electrode-Box-A2,0,18,61,-4.92063492063492,24.2126480221718
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Vu-vuong,Electrode-Box-A2,1,35,91,-3.92063492063492,15.371378180902
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Vu-vuong,Electrode-Box-A2,2,61,127,-2.92063492063492,8.53010833963215
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Vu-vuong,Electrode-Box-A2,3,34,146,-1.92063492063492,3.68883849836231
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Vu-vuong,Electrode-Box-A2,4,61,141,-0.920634920634921,0.847568657092467
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Vu-vuong,Electrode-Box-A2,5,37,151,0.0793650793650791,0.0062988158226253
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Vu-vuong,Electrode-Box-A2,6,49,131,1.07936507936508,1.16502897455278
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Vu-vuong,Electrode-Box-A2,7,65,149,2.07936507936508,4.32375913328294
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Vu-vuong,Electrode-Box-A2,8,67,141,3.07936507936508,9.4824892920131
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Vu-vuong,Electrode-Box-A2,9,73,140,4.07936507936508,16.6412194507433
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Vu-vuong,Electrode-Box-A2,10,72,131,5.07936507936508,25.7999496094734
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@@ -0,0 +1,153 @@
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subject,group,day,success,total,day_c,day_c2
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Banh-mi-1,Electrode-Box-B2,0,13,84,-6.125,37.515625
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Banh-mi-1,Electrode-Box-B2,1,35,86,-5.125,26.265625
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Banh-mi-1,Electrode-Box-B2,2,47,110,-4.125,17.015625
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Banh-mi-1,Electrode-Box-B2,3,65,140,-3.125,9.765625
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Banh-mi-1,Electrode-Box-B2,4,70,127,-2.125,4.515625
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Banh-mi-1,Electrode-Box-B2,5,102,142,-1.125,1.265625
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Banh-mi-1,Electrode-Box-B2,6,90,131,-0.125,0.015625
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Banh-mi-1,Electrode-Box-B2,7,109,148,0.875,0.765625
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Banh-mi-1,Electrode-Box-B2,8,104,137,1.875,3.515625
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Banh-mi-1,Electrode-Box-B2,9,119,150,2.875,8.265625
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Banh-mi-1,Electrode-Box-B2,10,121,158,3.875,15.015625
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Banh-mi-1,Electrode-Box-B2,11,121,148,4.875,23.765625
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Banh-mi-1,Electrode-Box-B2,12,120,149,5.875,34.515625
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Banh-mi-1,Electrode-Box-B2,13,135,154,6.875,47.265625
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Banh-mi-2,Electrode-Box-A2,0,25,97,-6.125,37.515625
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Banh-mi-2,Electrode-Box-A2,1,22,101,-5.125,26.265625
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Banh-mi-2,Electrode-Box-A2,2,22,119,-4.125,17.015625
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Banh-mi-2,Electrode-Box-A2,3,29,118,-3.125,9.765625
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Banh-mi-2,Electrode-Box-A2,4,27,136,-2.125,4.515625
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Banh-mi-2,Electrode-Box-A2,5,43,146,-1.125,1.265625
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Banh-mi-2,Electrode-Box-A2,6,74,146,-0.125,0.015625
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Banh-mi-2,Electrode-Box-A2,7,70,148,0.875,0.765625
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Banh-mi-2,Electrode-Box-A2,8,65,130,1.875,3.515625
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Banh-mi-2,Electrode-Box-A2,9,79,151,2.875,8.265625
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Banh-mi-2,Electrode-Box-A2,10,93,152,3.875,15.015625
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Egg-tart-1,Electrode-Box-B2,0,7,56,-6.125,37.515625
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Egg-tart-1,Electrode-Box-B2,1,16,78,-5.125,26.265625
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Egg-tart-1,Electrode-Box-B2,2,23,103,-4.125,17.015625
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Egg-tart-1,Electrode-Box-B2,3,63,120,-3.125,9.765625
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Egg-tart-1,Electrode-Box-B2,4,69,132,-2.125,4.515625
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Egg-tart-1,Electrode-Box-B2,5,83,136,-1.125,1.265625
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Egg-tart-1,Electrode-Box-B2,6,71,142,-0.125,0.015625
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Egg-tart-1,Electrode-Box-B2,7,79,138,0.875,0.765625
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Egg-tart-1,Electrode-Box-B2,8,98,142,1.875,3.515625
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Egg-tart-1,Electrode-Box-B2,9,89,139,2.875,8.265625
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Egg-tart-1,Electrode-Box-B2,10,96,143,3.875,15.015625
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Egg-tart-1,Electrode-Box-B2,11,96,148,4.875,23.765625
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Egg-tart-1,Electrode-Box-B2,12,101,156,5.875,34.515625
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Egg-tart-1,Electrode-Box-B2,13,103,152,6.875,47.265625
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Egg-tart-2,Electrode-Box-A2,0,9,32,-6.125,37.515625
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Egg-tart-2,Electrode-Box-A2,1,2,38,-5.125,26.265625
|
||||
Egg-tart-2,Electrode-Box-A2,2,31,93,-4.125,17.015625
|
||||
Egg-tart-2,Electrode-Box-A2,3,44,101,-3.125,9.765625
|
||||
Egg-tart-2,Electrode-Box-A2,4,54,131,-2.125,4.515625
|
||||
Egg-tart-2,Electrode-Box-A2,5,84,139,-1.125,1.265625
|
||||
Egg-tart-2,Electrode-Box-A2,6,85,145,-0.125,0.015625
|
||||
Egg-tart-2,Electrode-Box-A2,7,79,143,0.875,0.765625
|
||||
Egg-tart-2,Electrode-Box-A2,8,76,131,1.875,3.515625
|
||||
Egg-tart-2,Electrode-Box-A2,9,88,149,2.875,8.265625
|
||||
Egg-tart-2,Electrode-Box-A2,10,81,151,3.875,15.015625
|
||||
Egg-tart-2,Electrode-Box-A2,11,78,152,4.875,23.765625
|
||||
Egg-tart-2,Electrode-Box-A2,12,96,155,5.875,34.515625
|
||||
Egg-tart-2,Electrode-Box-A2,13,84,155,6.875,47.265625
|
||||
Khoai-lang-1,Electrode-Box-B2,0,3,69,-6.125,37.515625
|
||||
Khoai-lang-1,Electrode-Box-B2,1,18,97,-5.125,26.265625
|
||||
Khoai-lang-1,Electrode-Box-B2,2,27,84,-4.125,17.015625
|
||||
Khoai-lang-1,Electrode-Box-B2,3,46,121,-3.125,9.765625
|
||||
Khoai-lang-1,Electrode-Box-B2,4,65,143,-2.125,4.515625
|
||||
Khoai-lang-1,Electrode-Box-B2,5,76,141,-1.125,1.265625
|
||||
Khoai-lang-1,Electrode-Box-B2,6,79,146,-0.125,0.015625
|
||||
Khoai-lang-1,Electrode-Box-B2,7,81,153,0.875,0.765625
|
||||
Khoai-lang-1,Electrode-Box-B2,8,98,144,1.875,3.515625
|
||||
Khoai-lang-1,Electrode-Box-B2,9,101,149,2.875,8.265625
|
||||
Khoai-lang-1,Electrode-Box-B2,10,103,150,3.875,15.015625
|
||||
Khoai-lang-1,Electrode-Box-B2,11,113,154,4.875,23.765625
|
||||
Khoai-lang-1,Electrode-Box-B2,12,117,148,5.875,34.515625
|
||||
Khoai-lang-1,Electrode-Box-B2,13,114,146,6.875,47.265625
|
||||
Khoai-lang-2,Electrode-Box-A2,0,0,0,-6.125,37.515625
|
||||
Khoai-lang-2,Electrode-Box-A2,1,0,0,-5.125,26.265625
|
||||
Khoai-lang-2,Electrode-Box-A2,2,10,47,-4.125,17.015625
|
||||
Khoai-lang-2,Electrode-Box-A2,3,11,52,-3.125,9.765625
|
||||
Khoai-lang-2,Electrode-Box-A2,4,9,56,-2.125,4.515625
|
||||
Khoai-lang-2,Electrode-Box-A2,5,34,95,-1.125,1.265625
|
||||
Khoai-lang-2,Electrode-Box-A2,6,21,72,-0.125,0.015625
|
||||
Khoai-lang-2,Electrode-Box-A2,7,23,99,0.875,0.765625
|
||||
Khoai-lang-2,Electrode-Box-A2,8,64,136,1.875,3.515625
|
||||
Khoai-lang-2,Electrode-Box-A2,9,75,131,2.875,8.265625
|
||||
Khoai-lang-2,Electrode-Box-A2,10,63,134,3.875,15.015625
|
||||
Khoai-lang-2,Electrode-Box-A2,11,59,139,4.875,23.765625
|
||||
Khoai-lang-2,Electrode-Box-A2,12,51,129,5.875,34.515625
|
||||
Khoai-lang-2,Electrode-Box-A2,13,73,143,6.875,47.265625
|
||||
Khoai-tay-1,Electrode-Box-A,0,14,62,-6.125,37.515625
|
||||
Khoai-tay-1,Electrode-Box-A,1,22,83,-5.125,26.265625
|
||||
Khoai-tay-1,Electrode-Box-A,2,6,79,-4.125,17.015625
|
||||
Khoai-tay-1,Electrode-Box-A,3,28,97,-3.125,9.765625
|
||||
Khoai-tay-1,Electrode-Box-A,4,60,134,-2.125,4.515625
|
||||
Khoai-tay-1,Electrode-Box-A,5,75,138,-1.125,1.265625
|
||||
Khoai-tay-1,Electrode-Box-A,6,81,137,-0.125,0.015625
|
||||
Khoai-tay-1,Electrode-Box-A,7,78,147,0.875,0.765625
|
||||
Khoai-tay-1,Electrode-Box-A,8,91,132,1.875,3.515625
|
||||
Khoai-tay-1,Electrode-Box-A,9,99,146,2.875,8.265625
|
||||
Khoai-tay-1,Electrode-Box-A,10,94,143,3.875,15.015625
|
||||
Khoai-tay-1,Electrode-Box-A,11,110,156,4.875,23.765625
|
||||
Khoai-tay-1,Electrode-Box-A,12,105,143,5.875,34.515625
|
||||
Khoai-tay-1,Electrode-Box-A,13,106,153,6.875,47.265625
|
||||
Khoai-tay-2,Electrode-Box-A2,1,21,68,-5.125,26.265625
|
||||
Khoai-tay-2,Electrode-Box-A2,2,6,79,-4.125,17.015625
|
||||
Khoai-tay-2,Electrode-Box-A2,3,0,83,-3.125,9.765625
|
||||
Khoai-tay-2,Electrode-Box-A2,4,28,87,-2.125,4.515625
|
||||
Khoai-tay-2,Electrode-Box-A2,5,31,125,-1.125,1.265625
|
||||
Khoai-tay-2,Electrode-Box-A2,6,62,144,-0.125,0.015625
|
||||
Khoai-tay-2,Electrode-Box-A2,7,87,141,0.875,0.765625
|
||||
Khoai-tay-2,Electrode-Box-A2,8,105,152,1.875,3.515625
|
||||
Khoai-tay-2,Electrode-Box-A2,9,75,148,2.875,8.265625
|
||||
Khoai-tay-2,Electrode-Box-A2,10,101,149,3.875,15.015625
|
||||
Khoai-tay-2,Electrode-Box-A2,11,102,154,4.875,23.765625
|
||||
Khoai-tay-2,Electrode-Box-A2,12,95,144,5.875,34.515625
|
||||
Khoai-tay-2,Electrode-Box-A2,13,77,149,6.875,47.265625
|
||||
OM-2,Electrode-Box-A2,0,1,7,-6.125,37.515625
|
||||
OM-2,Electrode-Box-A2,1,11,33,-5.125,26.265625
|
||||
OM-2,Electrode-Box-A2,2,19,62,-4.125,17.015625
|
||||
OM-2,Electrode-Box-A2,3,29,117,-3.125,9.765625
|
||||
OM-2,Electrode-Box-A2,4,73,126,-2.125,4.515625
|
||||
OM-2,Electrode-Box-A2,5,53,135,-1.125,1.265625
|
||||
OM-2,Electrode-Box-A2,6,73,138,-0.125,0.015625
|
||||
OM-2,Electrode-Box-A2,7,80,131,0.875,0.765625
|
||||
OM-2,Electrode-Box-A2,8,91,141,1.875,3.515625
|
||||
OM-2,Electrode-Box-A2,9,90,135,2.875,8.265625
|
||||
OM-2,Electrode-Box-A2,10,95,142,3.875,15.015625
|
||||
OM-2,Electrode-Box-A2,11,60,133,4.875,23.765625
|
||||
OM-2,Electrode-Box-A2,12,58,142,5.875,34.515625
|
||||
Root-beer-1,Electrode-Box-B2,0,11,85,-6.125,37.515625
|
||||
Root-beer-1,Electrode-Box-B2,1,18,76,-5.125,26.265625
|
||||
Root-beer-1,Electrode-Box-B2,2,40,105,-4.125,17.015625
|
||||
Root-beer-1,Electrode-Box-B2,3,55,134,-3.125,9.765625
|
||||
Root-beer-1,Electrode-Box-B2,4,75,136,-2.125,4.515625
|
||||
Root-beer-1,Electrode-Box-B2,5,64,133,-1.125,1.265625
|
||||
Root-beer-1,Electrode-Box-B2,6,104,139,-0.125,0.015625
|
||||
Root-beer-1,Electrode-Box-B2,7,98,148,0.875,0.765625
|
||||
Root-beer-1,Electrode-Box-B2,8,81,145,1.875,3.515625
|
||||
Root-beer-1,Electrode-Box-B2,9,89,156,2.875,8.265625
|
||||
Root-beer-1,Electrode-Box-B2,10,105,158,3.875,15.015625
|
||||
Root-beer-2,Electrode-Box-A2,0,22,74,-6.125,37.515625
|
||||
Root-beer-2,Electrode-Box-A2,1,31,87,-5.125,26.265625
|
||||
Root-beer-2,Electrode-Box-A2,2,49,134,-4.125,17.015625
|
||||
Root-beer-2,Electrode-Box-A2,3,31,89,-3.125,9.765625
|
||||
Root-beer-2,Electrode-Box-A2,4,60,140,-2.125,4.515625
|
||||
Root-beer-2,Electrode-Box-A2,5,84,147,-1.125,1.265625
|
||||
Vu-vuong,Electrode-Box-A2,0,18,61,-6.125,37.515625
|
||||
Vu-vuong,Electrode-Box-A2,1,35,91,-5.125,26.265625
|
||||
Vu-vuong,Electrode-Box-A2,2,61,127,-4.125,17.015625
|
||||
Vu-vuong,Electrode-Box-A2,3,34,146,-3.125,9.765625
|
||||
Vu-vuong,Electrode-Box-A2,4,61,141,-2.125,4.515625
|
||||
Vu-vuong,Electrode-Box-A2,5,37,151,-1.125,1.265625
|
||||
Vu-vuong,Electrode-Box-A2,6,49,131,-0.125,0.015625
|
||||
Vu-vuong,Electrode-Box-A2,7,65,149,0.875,0.765625
|
||||
Vu-vuong,Electrode-Box-A2,8,67,141,1.875,3.515625
|
||||
Vu-vuong,Electrode-Box-A2,9,73,140,2.875,8.265625
|
||||
Vu-vuong,Electrode-Box-A2,10,72,131,3.875,15.015625
|
||||
Vu-vuong,Electrode-Box-A2,11,89,158,4.875,23.765625
|
||||
Vu-vuong,Electrode-Box-A2,12,97,154,5.875,34.515625
|
||||
Vu-vuong,Electrode-Box-A2,13,93,145,6.875,47.265625
|
||||
|
@@ -1,7 +1,8 @@
|
||||
==============================================================================
|
||||
PAPER LME REPLICATION -- mergeA2
|
||||
PAPER LME REPLICATION -- mergeA2 (full range)
|
||||
==============================================================================
|
||||
model: behavior ~ stim + day + stim:day + (1|rat) [stim: Electrode-Box-B2=1 vs Electrode-Box-A2=0]
|
||||
behavior = successful reaches (COUNT per session)
|
||||
N = 8 rats, 109 sessions (day raw; day 0 = paper "Day 1")
|
||||
day coverage: stim(B2) 0..22, control(A2) 0..14
|
||||
** WARNING: unequal day coverage -- the full-range stim:day interaction
|
||||
@@ -63,5 +64,9 @@ day (learning) t(105)= 9.82 F(1)= 96.388 p=1.573e-16
|
||||
stim (main, Day 1) t(105)= 3.43 F(1)= 11.778 p=0.0008585
|
||||
interaction 95% CI: [-3.80, -0.56]
|
||||
|
||||
INTERPRETATION
|
||||
- stim x day interaction: SIGNIFICANT (p=0.0090, slope diff=-2.18) -> tDCS (Box-B2) improves SLOWER -- groups converge.
|
||||
- stim main effect on Day 1 (our day 0): SIGNIFICANT (p=0.0009) -> groups already DIFFER on Day 1.
|
||||
|
||||
Paper (N=24): interaction t(227)=2.68, F(1)=7.12, p=0.008; day t(227)=9.64,
|
||||
F(1)=267.64, p=1.2e-18; stim t(227)=0.23, F(1)=0.053, p=0.81.
|
||||
|
||||
@@ -0,0 +1,71 @@
|
||||
==============================================================================
|
||||
PAPER LME REPLICATION -- mergeNaive (days 0-10)
|
||||
==============================================================================
|
||||
model: behavior ~ stim + day + stim:day + (1|rat) [stim: Electrode-Box-B2=1 vs Electrode-Box-A2=0]
|
||||
behavior = successful reaches (COUNT per session)
|
||||
N = 11 rats, 115 sessions (day raw; day 0 = paper "Day 1")
|
||||
day coverage: stim(B2) 0..10, control(A2) 0..10
|
||||
(Equal day coverage -- the stim:day interaction over this window is NOT
|
||||
confounded by the full-range coverage imbalance.)
|
||||
|
||||
==============================================================================
|
||||
FULL MODEL SUMMARY -- fitlme: behavior ~ stim + day + stim:day + (1|rat)
|
||||
==============================================================================
|
||||
|
||||
Linear mixed-effects model fit by ML
|
||||
|
||||
Model information:
|
||||
Number of observations 115
|
||||
Fixed effects coefficients 4
|
||||
Random effects coefficients 11
|
||||
Covariance parameters 2
|
||||
|
||||
Formula:
|
||||
behavior ~ 1 + day*stim + (1 | rat)
|
||||
|
||||
Model fit statistics:
|
||||
AIC BIC LogLikelihood Deviance
|
||||
952.54 969.01 -470.27 940.54
|
||||
|
||||
Fixed effects coefficients (95% CIs):
|
||||
Name Estimate SE tStat DF pValue
|
||||
{'(Intercept)'} 10.33 4.3573 2.3706 111 0.019482
|
||||
{'day' } 8.0907 0.51948 15.575 111 1.0806e-29
|
||||
{'stim' } 9.4432 7.1538 1.32 111 0.18954
|
||||
{'day:stim' } 1.6184 0.8216 1.9699 111 0.051345
|
||||
|
||||
|
||||
Lower Upper
|
||||
1.6953 18.964
|
||||
7.0613 9.12
|
||||
-4.7326 23.619
|
||||
-0.0096134 3.2465
|
||||
|
||||
Random effects covariance parameters (95% CIs):
|
||||
Group: rat (11 Levels)
|
||||
Name1 Name2 Type Estimate
|
||||
{'(Intercept)'} {'(Intercept)'} {'std'} 8.4877
|
||||
|
||||
|
||||
Lower Upper
|
||||
5.0001 14.408
|
||||
|
||||
Group: Error
|
||||
Name Estimate Lower Upper
|
||||
{'Res Std'} 13.352 11.652 15.299
|
||||
|
||||
|
||||
|
||||
effect t (df) F (df1) p
|
||||
------------------------------------------------------------------
|
||||
stim x day (interaction) t(111)= 1.97 F(1)= 3.880 p=0.05134
|
||||
day (learning) t(111)= 15.57 F(1)= 242.567 p=1.081e-29
|
||||
stim (main, Day 1) t(111)= 1.32 F(1)= 1.742 p=0.1895
|
||||
interaction 95% CI: [-0.01, +3.25]
|
||||
|
||||
INTERPRETATION
|
||||
- stim x day interaction: n.s. (p=0.0513, slope diff=+1.62) -> slopes parallel -- no differential learning rate over this window.
|
||||
- stim main effect on Day 1 (our day 0): n.s. (p=0.1895) -> groups are comparable on Day 1.
|
||||
|
||||
Paper (N=24): interaction t(227)=2.68, F(1)=7.12, p=0.008; day t(227)=9.64,
|
||||
F(1)=267.64, p=1.2e-18; stim t(227)=0.23, F(1)=0.053, p=0.81.
|
||||
@@ -0,0 +1,71 @@
|
||||
==============================================================================
|
||||
PAPER LME REPLICATION -- mergeNaive (days 0-13)
|
||||
==============================================================================
|
||||
model: behavior ~ stim + day + stim:day + (1|rat) [stim: Electrode-Box-B2=1 vs Electrode-Box-A2=0]
|
||||
behavior = successful reaches (COUNT per session)
|
||||
N = 11 rats, 138 sessions (day raw; day 0 = paper "Day 1")
|
||||
day coverage: stim(B2) 0..13, control(A2) 0..13
|
||||
(Equal day coverage -- the stim:day interaction over this window is NOT
|
||||
confounded by the full-range coverage imbalance.)
|
||||
|
||||
==============================================================================
|
||||
FULL MODEL SUMMARY -- fitlme: behavior ~ stim + day + stim:day + (1|rat)
|
||||
==============================================================================
|
||||
|
||||
Linear mixed-effects model fit by ML
|
||||
|
||||
Model information:
|
||||
Number of observations 138
|
||||
Fixed effects coefficients 4
|
||||
Random effects coefficients 11
|
||||
Covariance parameters 2
|
||||
|
||||
Formula:
|
||||
behavior ~ 1 + day*stim + (1 | rat)
|
||||
|
||||
Model fit statistics:
|
||||
AIC BIC LogLikelihood Deviance
|
||||
1164.9 1182.4 -576.44 1152.9
|
||||
|
||||
Fixed effects coefficients (95% CIs):
|
||||
Name Estimate SE tStat DF pValue
|
||||
{'(Intercept)'} 16.254 4.2865 3.792 134 0.00022519
|
||||
{'day' } 6.4041 0.42677 15.006 134 1.7662e-30
|
||||
{'stim' } 8.9845 7.0391 1.2764 134 0.20403
|
||||
{'day:stim' } 1.7992 0.67672 2.6587 134 0.008801
|
||||
|
||||
|
||||
Lower Upper
|
||||
7.7764 24.732
|
||||
5.5601 7.2482
|
||||
-4.9377 22.907
|
||||
0.46073 3.1376
|
||||
|
||||
Random effects covariance parameters (95% CIs):
|
||||
Group: rat (11 Levels)
|
||||
Name1 Name2 Type Estimate
|
||||
{'(Intercept)'} {'(Intercept)'} {'std'} 8.1481
|
||||
|
||||
|
||||
Lower Upper
|
||||
4.7633 13.938
|
||||
|
||||
Group: Error
|
||||
Name Estimate Lower Upper
|
||||
{'Res Std'} 14.825 13.109 16.766
|
||||
|
||||
|
||||
|
||||
effect t (df) F (df1) p
|
||||
------------------------------------------------------------------
|
||||
stim x day (interaction) t(134)= 2.66 F(1)= 7.068 p=0.008801
|
||||
day (learning) t(134)= 15.01 F(1)= 225.182 p=1.766e-30
|
||||
stim (main, Day 1) t(134)= 1.28 F(1)= 1.629 p=0.204
|
||||
interaction 95% CI: [+0.46, +3.14]
|
||||
|
||||
INTERPRETATION
|
||||
- stim x day interaction: SIGNIFICANT (p=0.0088, slope diff=+1.80) -> tDCS (Box-B2) improves FASTER -- benefit accumulates over training.
|
||||
- stim main effect on Day 1 (our day 0): n.s. (p=0.2040) -> groups are comparable on Day 1.
|
||||
|
||||
Paper (N=24): interaction t(227)=2.68, F(1)=7.12, p=0.008; day t(227)=9.64,
|
||||
F(1)=267.64, p=1.2e-18; stim t(227)=0.23, F(1)=0.053, p=0.81.
|
||||
@@ -11,7 +11,8 @@ scenarios = {'unmerged_full', 'unmerged_d0_10', ...
|
||||
'lme_unmerged_d0_13', 'lme_mergeA2_d0_13', 'lme_mergeB2_d0_13', ...
|
||||
'phase_unmerged', 'phase_mergeA2', 'phase_mergeB2', ...
|
||||
'paper_unmerged', 'paper_mergeA2', 'paper_mergeB2', ...
|
||||
'mergeNaive_full', 'paper_mergeNaive', 'phase_mergeNaive'};
|
||||
'mergeNaive_full', 'paper_mergeNaive', 'phase_mergeNaive', ...
|
||||
'paper_mergeNaive_d0_10', 'paper_mergeNaive_d0_13'};
|
||||
|
||||
for i = 1:numel(scenarios)
|
||||
fprintf('\n\n### Running scenario: %s ###\n', scenarios{i});
|
||||
|
||||
@@ -136,6 +136,12 @@ switch scenario
|
||||
case 'paper_mergeNaive'
|
||||
tdcs_paper_lme('mergeNaive', cfg);
|
||||
|
||||
case 'paper_mergeNaive_d0_10'
|
||||
tdcs_paper_lme('mergeNaive', cfg, 'd0_10');
|
||||
|
||||
case 'paper_mergeNaive_d0_13'
|
||||
tdcs_paper_lme('mergeNaive', cfg, 'd0_13');
|
||||
|
||||
case 'phase_mergeNaive'
|
||||
tdcs_phase_lme('mergeNaive', cfg);
|
||||
|
||||
|
||||
@@ -1,23 +1,40 @@
|
||||
function L = tdcs_paper_lme(mergeKey, cfg)
|
||||
function L = tdcs_paper_lme(mergeKey, cfg, windowKey)
|
||||
%TDCS_PAPER_LME Replicate the paper's linear mixed model, verbatim formula:
|
||||
% behavior ~ stim + day + stim:day + (1|rat)
|
||||
% fit with fitlme on the Box-B2 (stim = 1, tDCS) vs Box-A2 (stim = 0, control)
|
||||
% subset of the MERGEKEY grouping ('unmerged'|'mergeA2'|'mergeB2'), over the
|
||||
% full training range. `behavior` = successful reaches, `day` = training day
|
||||
% (raw; day 0 = the paper's "Day 1"), `rat` = subject. Reports the three
|
||||
% effects (stim x day interaction, day, stim) as t(df) / F(1) / p with the
|
||||
% interaction 95% CI, alongside the paper's reference values, and writes
|
||||
% results/paper_<MERGEKEY>.txt.
|
||||
% subset of the MERGEKEY grouping ('unmerged'|'mergeA2'|'mergeB2'|'mergeNaive').
|
||||
% `behavior` = successful reaches (COUNT), `day` = training day (raw; day 0 =
|
||||
% the paper's "Day 1"), `rat` = subject. Reports the three effects (stim x day
|
||||
% interaction, day, stim) as t(df) / F(1) / p with the interaction 95% CI,
|
||||
% alongside the paper's reference values, and writes a results/ txt file.
|
||||
%
|
||||
% L = TDCS_PAPER_LME(MERGEKEY, CFG) uses the full training range (default) and
|
||||
% writes results/paper_<MERGEKEY>.txt.
|
||||
%
|
||||
% L = TDCS_PAPER_LME(MERGEKEY, CFG, WINDOWKEY) restricts to a day window --
|
||||
% WINDOWKEY is 'full' (day <= 26), 'd0_10' (day <= 10), or 'd0_13' (day <= 13,
|
||||
% the last day Box-A2 has data). The windowed fits give the two anchor groups
|
||||
% EQUAL day coverage, so the stim:day interaction is not confounded by the
|
||||
% full-range coverage imbalance; windowed runs write
|
||||
% results/paper_<MERGEKEY>_<WINDOWKEY>.txt.
|
||||
%
|
||||
% (This is the same model as tdcs_lme -- success ~ day*tDCS + (1|subject) --
|
||||
% written with the paper's exact term order and variable names.)
|
||||
%
|
||||
% L fields: .model .nRats .nObs and .stim/.day/.interaction effect structs
|
||||
% (.estimate .se .t .df .p from Coefficients; .F .df1 .df2 .Fp from ANOVA;
|
||||
% .ci = coefficient 95% CI).
|
||||
% L fields: .model .nRats .nObs .windowKey and .stim/.day/.interaction effect
|
||||
% structs (.estimate .se .t .df .p from Coefficients; .F .df1 .df2 .Fp from
|
||||
% ANOVA; .ci = coefficient 95% CI).
|
||||
|
||||
Sfull = tdcs_scenario_data([mergeKey '_full']);
|
||||
A = Sfull(ismember(Sfull.group, {cfg.anchorLow, cfg.anchorHigh}), :);
|
||||
if nargin < 3 || isempty(windowKey)
|
||||
windowKey = 'full';
|
||||
end
|
||||
if ~ismember(windowKey, {'full', 'd0_10', 'd0_13'})
|
||||
error('tdcs_paper_lme:badWindow', ...
|
||||
'windowKey must be ''full'', ''d0_10'', or ''d0_13'' (got "%s").', windowKey);
|
||||
end
|
||||
|
||||
S = tdcs_scenario_data([mergeKey '_' windowKey]);
|
||||
A = S(ismember(S.group, {cfg.anchorLow, cfg.anchorHigh}), :);
|
||||
|
||||
tbl = table();
|
||||
tbl.behavior = A.success;
|
||||
@@ -29,6 +46,7 @@ model = fitlme(tbl, 'behavior ~ stim + day + stim:day + (1|rat)');
|
||||
C = model.Coefficients; An = anova(model); ci = coefCI(model);
|
||||
|
||||
L.model = model;
|
||||
L.windowKey = windowKey;
|
||||
L.nRats = numel(unique(tbl.rat));
|
||||
L.nObs = height(tbl);
|
||||
L.maxDayCtrl = max(tbl.day(tbl.stim == 0));
|
||||
@@ -54,18 +72,32 @@ e = struct('estimate', C.Estimate(i), 'se', C.SE(i), 't', C.tStat(i), ...
|
||||
end
|
||||
|
||||
function localReport(L, mergeKey, cfg)
|
||||
window = L.windowKey;
|
||||
if strcmp(window, 'full')
|
||||
scenarioName = ['paper_' mergeKey];
|
||||
windowLabel = 'full range';
|
||||
else
|
||||
scenarioName = ['paper_' mergeKey '_' window];
|
||||
windowLabel = strrep(window, 'd0_10', 'days 0-10');
|
||||
windowLabel = strrep(windowLabel, 'd0_13', 'days 0-13');
|
||||
end
|
||||
|
||||
bar = repmat('=', 1, 78);
|
||||
s = sprintf('%s\n', bar);
|
||||
s = [s sprintf('PAPER LME REPLICATION -- %s\n', mergeKey)];
|
||||
s = [s sprintf('PAPER LME REPLICATION -- %s (%s)\n', mergeKey, windowLabel)];
|
||||
s = [s sprintf('%s\n', bar)];
|
||||
s = [s sprintf('model: behavior ~ stim + day + stim:day + (1|rat) [stim: %s=1 vs %s=0]\n', ...
|
||||
cfg.anchorHigh, cfg.anchorLow)];
|
||||
s = [s sprintf('behavior = successful reaches (COUNT per session)\n')];
|
||||
s = [s sprintf('N = %d rats, %d sessions (day raw; day 0 = paper "Day 1")\n', L.nRats, L.nObs)];
|
||||
s = [s sprintf('day coverage: stim(B2) 0..%d, control(A2) 0..%d\n', L.maxDayStim, L.maxDayCtrl)];
|
||||
if abs(L.maxDayStim - L.maxDayCtrl) > 2
|
||||
s = [s sprintf(['** WARNING: unequal day coverage -- the full-range stim:day interaction\n' ...
|
||||
' extrapolates the control group''s line and is CONFOUNDED here (the paper''s\n' ...
|
||||
' groups had equal coverage). See the _d0_13 fair-window and phased analyses. **\n'])];
|
||||
else
|
||||
s = [s sprintf(['(Equal day coverage -- the stim:day interaction over this window is NOT\n' ...
|
||||
' confounded by the full-range coverage imbalance.)\n'])];
|
||||
end
|
||||
s = [s sprintf('\n')];
|
||||
s = [s tdcs_model_summary(L.model, 'fitlme: behavior ~ stim + day + stim:day + (1|rat)') sprintf('\n')];
|
||||
@@ -75,6 +107,18 @@ s = [s localRow('stim x day (interaction)', L.interaction)];
|
||||
s = [s localRow('day (learning)', L.day)];
|
||||
s = [s localRow('stim (main, Day 1)', L.stim)];
|
||||
s = [s sprintf('interaction 95%% CI: [%+.2f, %+.2f]\n', L.interaction.ci(1), L.interaction.ci(2))];
|
||||
s = [s sprintf('\nINTERPRETATION\n')];
|
||||
if L.interaction.p >= 0.05
|
||||
interTxt = 'slopes parallel -- no differential learning rate over this window';
|
||||
elseif L.interaction.estimate > 0
|
||||
interTxt = 'tDCS (Box-B2) improves FASTER -- benefit accumulates over training';
|
||||
else
|
||||
interTxt = 'tDCS (Box-B2) improves SLOWER -- groups converge';
|
||||
end
|
||||
s = [s sprintf(' - stim x day interaction: %s (p=%.4f, slope diff=%+.2f) -> %s.\n', ...
|
||||
localSigTxt(L.interaction.p), L.interaction.p, L.interaction.estimate, interTxt)];
|
||||
s = [s sprintf(' - stim main effect on Day 1 (our day 0): %s (p=%.4f) -> groups %s on Day 1.\n', ...
|
||||
localSigTxt(L.stim.p), L.stim.p, localPick(L.stim.p < 0.05, 'already DIFFER', 'are comparable'))];
|
||||
s = [s sprintf(['\nPaper (N=24): interaction t(227)=2.68, F(1)=7.12, p=0.008; ' ...
|
||||
'day t(227)=9.64,\n F(1)=267.64, p=1.2e-18; stim t(227)=0.23, F(1)=0.053, p=0.81.\n'])];
|
||||
|
||||
@@ -82,7 +126,7 @@ fprintf('%s', s);
|
||||
thisDir = fileparts(mfilename('fullpath'));
|
||||
resDir = fullfile(thisDir, 'results');
|
||||
if ~exist(resDir, 'dir'); mkdir(resDir); end
|
||||
fid = fopen(fullfile(resDir, ['paper_' mergeKey '.txt']), 'w');
|
||||
fid = fopen(fullfile(resDir, [scenarioName '.txt']), 'w');
|
||||
if fid < 0; error('tdcs_paper_lme:fopen', 'Cannot open results file.'); end
|
||||
cleanup = onCleanup(@() fclose(fid)); %#ok<NASGU>
|
||||
fprintf(fid, '%s', s);
|
||||
@@ -91,3 +135,11 @@ end
|
||||
function r = localRow(name, e)
|
||||
r = sprintf('%-26s t(%d)=%6.2f F(%d)=%8.3f p=%.4g\n', name, e.df, e.t, e.df1, e.F, e.p);
|
||||
end
|
||||
|
||||
function t = localSigTxt(p)
|
||||
if p < 0.05; t = 'SIGNIFICANT'; else; t = 'n.s.'; end
|
||||
end
|
||||
|
||||
function t = localPick(b, yes, no)
|
||||
if b; t = yes; else; t = no; end
|
||||
end
|
||||
|
||||
@@ -59,6 +59,36 @@ classdef tLme < matlab.unittest.TestCase
|
||||
testCase.verifyError(@() tdcs_glm('lme_nonsense'), 'tdcs_glm:badScenario');
|
||||
end
|
||||
|
||||
function testPaperMergeNaiveWindowedFairCoverage(testCase)
|
||||
% The windowed paper_mergeNaive_* runs cap both anchor arms at the
|
||||
% window end (equal coverage -> no confound warning), write their own
|
||||
% results file, and embed the full fitlme summary. Unlike mergeA2,
|
||||
% the pooled-naive control keeps the interaction significant in the
|
||||
% fair d0_13 window (~ the paper's F=7.12, p=0.008).
|
||||
here = fileparts(fileparts(mfilename('fullpath'))); % analysis/matlab
|
||||
resDir = fullfile(here, 'results');
|
||||
for w = {'d0_10', 'd0_13'}
|
||||
name = ['paper_mergeNaive_' w{1}];
|
||||
evalc(sprintf('tdcs_glm(''%s'')', name));
|
||||
txt = fileread(fullfile(resDir, [name '.txt']));
|
||||
testCase.verifyTrue(contains(txt, 'Equal day coverage'), ...
|
||||
sprintf('%s: expected equal (fair) day coverage', name));
|
||||
testCase.verifyFalse(contains(txt, '** WARNING'), ...
|
||||
sprintf('%s: fair window should not warn', name));
|
||||
testCase.verifyEqual(count(txt, 'Fixed effects coefficients (95% CIs):'), 1);
|
||||
end
|
||||
% Fair-window d0_13 interaction reproduces the paper (~F=7.1, p~0.009).
|
||||
L = tdcs_paper_lme('mergeNaive', tdcs_config(), 'd0_13');
|
||||
testCase.verifyEqual(L.maxDayStim, L.maxDayCtrl); % equal coverage
|
||||
testCase.verifyLessThan(L.interaction.p, 0.05);
|
||||
testCase.verifyGreaterThan(L.interaction.estimate, 0);
|
||||
end
|
||||
|
||||
function testPaperLmeBadWindowErrors(testCase)
|
||||
testCase.verifyError(@() tdcs_paper_lme('mergeNaive', tdcs_config(), 'bogus'), ...
|
||||
'tdcs_paper_lme:badWindow');
|
||||
end
|
||||
|
||||
function testReportsIncludeFullModelSummary(testCase)
|
||||
% Every scenario prints the full native fitlme summary. The lme_*,
|
||||
% paper_*, and phase_* reports each embed disp(model), whose
|
||||
|
||||
Reference in New Issue
Block a user