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experiments-database/analysis/matlab/variations/naive_a2_d0_10/result.txt
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Experiments DB Dev 6ba21a1a35 analysis(matlab): rate + count outputs, variation batch 2
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:52 -04:00

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==============================================================================
VARIATION: naive_a2_d0_10 [metric: success COUNT]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success COUNT)
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-B2
control (stim=0): Electrode-Box-A2, Naive
N = 10 rats, 104 sessions raw day coverage: treat 0..10, control 0..10
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
==============================================================================
Linear mixed-effects model fit by ML
Model information:
Number of observations 104
Fixed effects coefficients 4
Random effects coefficients 10
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
869.17 885.04 -428.58 857.17
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 10.33 4.4952 2.298 100 0.023646
{'day' } 8.0905 0.53615 15.09 100 1.598e-27
{'stim' } 12.019 8.117 1.4807 100 0.14184
{'day:stim' } 1.4337 0.92893 1.5434 100 0.12589
Lower Upper
1.4115 19.248
7.0268 9.1542
-4.0853 28.123
-0.40926 3.2767
Random effects covariance parameters (95% CIs):
Group: rat (10 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 8.753
Lower Upper
5.0208 15.26
Group: Error
Name Estimate Lower Upper
{'Res Std'} 13.78 11.942 15.902
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
----------------------------------------------------------------------------
stim x day (interaction) t(100)= 1.54 F(1)= 2.382 p=0.1259 p=0.1261 (df=95)
day (learning) t(100)= 15.09 F(1)=227.710 p=1.598e-27 p=4.059e-27 (df=96)
stim (main, window start) t(100)= 1.48 F(1)= 2.192 p=0.1418 p=0.1543 (df=20)
interaction 95% CI: [-0.4093, +3.277]
HONEST LME (per-animal random slope, day|rat): interaction F(1,9.0)=1.16, p=0.3093
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction n.s. -- slopes parallel (no differential learning rate) (p=0.1259, slope diff=+1.434)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.