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experiments-database/analysis/matlab/variations/naive_boxa_d6_10/result.txt
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Experiments DB Dev 0e16690c8f analysis(matlab): rate + count outputs, variation batch 3
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:52 -04:00

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==============================================================================
VARIATION: naive_boxa_d6_10 [metric: success COUNT]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success COUNT)
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-B2
control (stim=0): Electrode-Box-A, Electrode-Box-A2, Naive
N = 10 rats, 50 sessions raw day coverage: treat 6..10, control 6..10
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
==============================================================================
Linear mixed-effects model fit by ML
Model information:
Number of observations 50
Fixed effects coefficients 4
Random effects coefficients 10
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
405.22 416.69 -196.61 393.22
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 64.543 5.1823 12.454 46 2.4341e-16
{'day' } 5.7857 1.2123 4.7727 46 1.8769e-05
{'stim' } 23.99 9.4616 2.5356 46 0.014689
{'day:stim' } -1.619 2.2133 -0.73152 46 0.46817
Lower Upper
54.111 74.974
3.3456 8.2259
4.9452 43.036
-6.0741 2.836
Random effects covariance parameters (95% CIs):
Group: rat (10 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 11.237
Lower Upper
6.7417 18.73
Group: Error
Name Estimate Lower Upper
{'Res Std'} 10.142 8.1466 12.627
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
----------------------------------------------------------------------------
stim x day (interaction) t(46)= -0.73 F(1)= 0.535 p=0.4682 p=0.4687 (df=40)
day (learning) t(46)= 4.77 F(1)= 22.779 p=1.877e-05 p=2.436e-05 (df=40)
stim (main, window start) t(46)= 2.54 F(1)= 6.429 p=0.01469 p=0.02198 (df=16)
interaction 95% CI: [-6.074, +2.836]
HONEST LME (per-animal random slope, day|rat): interaction F(1,10.0)=0.41, p=0.5344
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction n.s. -- slopes parallel (no differential learning rate) (p=0.4682, slope diff=-1.619)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.