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experiments-database/analysis/matlab/variations/naive_a2_d0_5/result.txt
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Experiments DB Dev 6ba21a1a35 analysis(matlab): rate + count outputs, variation batch 2
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:52 -04:00

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VARIATION: naive_a2_d0_5 [metric: success COUNT]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success COUNT)
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-B2
control (stim=0): Electrode-Box-A2, Naive
N = 10 rats, 59 sessions raw day coverage: treat 0..5, control 0..5
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
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Linear mixed-effects model fit by ML
Model information:
Number of observations 59
Fixed effects coefficients 4
Random effects coefficients 10
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
489.28 501.74 -238.64 477.28
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 9.0584 5.0267 1.8021 55 0.077018
{'day' } 8.2568 1.1279 7.3206 55 1.1254e-09
{'stim' } 0.44958 9.048 0.049688 55 0.96055
{'day:stim' } 6.9622 2.0162 3.4532 55 0.0010733
Lower Upper
-1.0153 19.132
5.9965 10.517
-17.683 18.582
2.9217 11.003
Random effects covariance parameters (95% CIs):
Group: rat (10 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 9.6432
Lower Upper
5.5002 16.907
Group: Error
Name Estimate Lower Upper
{'Res Std'} 12.109 9.9317 14.763
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
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stim x day (interaction) t(55)= 3.45 F(1)= 11.924 p=0.001073 p=0.001152 (df=49)
day (learning) t(55)= 7.32 F(1)= 53.591 p=1.125e-09 p=2.092e-09 (df=49)
stim (main, window start) t(55)= 0.05 F(1)= 0.002 p=0.9606 p=0.9609 (df=20)
interaction 95% CI: [+2.922, +11]
HONEST LME (per-animal random slope, day|rat): interaction F(1,9.7)=6.65, p=0.02815
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction SIGNIFICANT positive -- treatment improves FASTER (benefit accumulates) (p=0.001073, slope diff=+6.962)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.