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experiments-database/analysis/matlab/variations/naive_a2_d0_13/result.txt
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Experiments DB Dev 6ba21a1a35 analysis(matlab): rate + count outputs, variation batch 2
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:52 -04:00

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VARIATION: naive_a2_d0_13 [metric: success COUNT]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success COUNT)
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-B2
control (stim=0): Electrode-Box-A2, Naive
N = 10 rats, 124 sessions raw day coverage: treat 0..13, control 0..13
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
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Linear mixed-effects model fit by ML
Model information:
Number of observations 124
Fixed effects coefficients 4
Random effects coefficients 10
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
1055.4 1072.3 -521.69 1043.4
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 16.252 4.4327 3.6664 120 0.00036779
{'day' } 6.4053 0.43948 14.575 120 2.5469e-28
{'stim' } 11.52 8.023 1.4359 120 0.15363
{'day:stim' } 1.6137 0.77637 2.0785 120 0.039797
Lower Upper
7.4757 25.029
5.5352 7.2755
-4.3648 27.405
0.076509 3.1508
Random effects covariance parameters (95% CIs):
Group: rat (10 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 8.4599
Lower Upper
4.8243 14.835
Group: Error
Name Estimate Lower Upper
{'Res Std'} 15.264 13.405 17.381
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
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stim x day (interaction) t(120)= 2.08 F(1)= 4.320 p=0.0398 p=0.03986 (df=117)
day (learning) t(120)= 14.57 F(1)=212.424 p=2.547e-28 p=3.246e-28 (df=119)
stim (main, window start) t(120)= 1.44 F(1)= 2.062 p=0.1536 p=0.1655 (df=21)
interaction 95% CI: [+0.07651, +3.151]
HONEST LME (per-animal random slope, day|rat): interaction F(1,41.7)=3.81, p=0.05781
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction SIGNIFICANT positive -- treatment improves FASTER (benefit accumulates) (p=0.0398, slope diff=+1.614)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.