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experiments-database/analysis/matlab/variations/boxa_b2_d0_10
Experiments DB Dev 378ad6da05 analysis(matlab): add log(day) model + Cohen's f + power to every variation
Add variation_logpower.m (self-contained) + make_variation_logpower.m,
dropping logpowersim.m + logpower_result.txt into all 28 variation folders.
Matches the paper's power code: models behavior ~ stim + log(day) +
stim:log(day) + (1|rat) (log(day+1), since our day 0 = paper Day 1), reports
Cohen's f (partial eta^2 of the interaction) and the interaction under
residual/Satterthwaite/honest random-slope DF, then runs the Monte-Carlo power
sim on the log-day ground truth (per-animal cluster-honest + LME power).

Notable: under log(day) the accumulating divergence is captured more sharply,
so several full-window scenarios reach honest significance that were n.s. under
raw day (e.g. right_only_d0_13 honest p=0.003, unmerge_d0_13 0.021,
unmerge_d0_10 0.036); Cohen's f is small-medium (~0.10-0.34).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-23 14:37:50 -04:00
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