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experiments-database/analysis/matlab/variations/boxa_b2_d6_10/result_rate.txt
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Experiments DB Dev 0a438a4649 analysis(matlab): rate + count outputs, variation batch 1
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:51 -04:00

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VARIATION: boxa_b2_d6_10 [metric: success RATE (success/attempts)]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success RATE (success/attempts))
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-A, Electrode-Box-B2
control (stim=0): Electrode-Box-A2
N = 6 rats, 30 sessions raw day coverage: treat 6..10, control 6..10
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
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Linear mixed-effects model fit by ML
Model information:
Number of observations 30
Fixed effects coefficients 4
Random effects coefficients 6
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
-69.131 -60.724 40.566 -81.131
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 0.52619 0.040432 13.014 26 6.8005e-13
{'day' } 0.0099391 0.012422 0.80014 26 0.43088
{'stim' } 0.099864 0.049519 2.0167 26 0.054168
{'day:stim' } 0.0062025 0.015213 0.4077 26 0.68683
Lower Upper
0.44308 0.6093
-0.015594 0.035472
-0.0019243 0.20165
-0.025069 0.037474
Random effects covariance parameters (95% CIs):
Group: rat (6 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 0.037656
Lower Upper
0.016562 0.085613
Group: Error
Name Estimate Lower Upper
{'Res Std'} 0.055552 0.041864 0.073715
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
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stim x day (interaction) t(26)= 0.41 F(1)= 0.166 p=0.6868 p=0.6871 (df=24)
day (learning) t(26)= 0.80 F(1)= 0.640 p=0.4309 p=0.4315 (df=24)
stim (main, window start) t(26)= 2.02 F(1)= 4.067 p=0.05417 p=0.06308 (df=14)
interaction 95% CI: [-0.02507, +0.03747]
HONEST LME (per-animal random slope, day|rat): interaction F(1,6.0)=0.10, p=0.7623
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction n.s. -- slopes parallel (no differential learning rate) (p=0.6868, slope diff=+0.006202)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.