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experiments-database/analysis/matlab/variations/boxa_b2_d0_5/result_rate.txt
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Experiments DB Dev 0a438a4649 analysis(matlab): rate + count outputs, variation batch 1
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:51 -04:00

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VARIATION: boxa_b2_d0_5 [metric: success RATE (success/attempts)]
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model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success RATE (success/attempts))
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-A, Electrode-Box-B2
control (stim=0): Electrode-Box-A2
N = 7 rats, 42 sessions raw day coverage: treat 0..5, control 0..5
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
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Linear mixed-effects model fit by ML
Model information:
Number of observations 42
Fixed effects coefficients 4
Random effects coefficients 7
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
-68.33 -57.904 40.165 -80.33
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 0.2186 0.045229 4.8332 38 2.2327e-05
{'day' } 0.043366 0.011725 3.6987 38 0.00068267
{'stim' } -0.059971 0.059832 -1.0023 38 0.32253
{'day:stim' } 0.042705 0.01551 2.7533 38 0.0089978
Lower Upper
0.12704 0.31016
0.01963 0.067101
-0.1811 0.061153
0.011306 0.074103
Random effects covariance parameters (95% CIs):
Group: rat (7 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 0.048546
Lower Upper
0.021809 0.10806
Group: Error
Name Estimate Lower Upper
{'Res Std'} 0.084953 0.067211 0.10738
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
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stim x day (interaction) t(38)= 2.75 F(1)= 7.581 p=0.008998 p=0.00929 (df=35)
day (learning) t(38)= 3.70 F(1)= 13.680 p=0.0006827 p=0.0007391 (df=35)
stim (main, window start) t(38)= -1.00 F(1)= 1.005 p=0.3225 p=0.3289 (df=19)
interaction 95% CI: [+0.01131, +0.0741]
HONEST LME (per-animal random slope, day|rat): interaction F(1,8.8)=5.05, p=0.05179
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction SIGNIFICANT positive -- treatment improves FASTER (benefit accumulates) (p=0.008998, slope diff=+0.0427)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.