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experiments-database/analysis/matlab/variations/boxa_a2_d6_10/result.txt
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Experiments DB Dev 0a438a4649 analysis(matlab): rate + count outputs, variation batch 1
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-24 02:32:51 -04:00

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==============================================================================
VARIATION: boxa_a2_d6_10 [metric: success COUNT]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success COUNT)
day = training day within window (0 = first analyzed day)
treatment (stim=1): Electrode-Box-B2
control (stim=0): Electrode-Box-A, Electrode-Box-A2
N = 6 rats, 30 sessions raw day coverage: treat 6..10, control 6..10
(equal day coverage over this window)
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FULL MODEL SUMMARY -- fitlme
==============================================================================
Linear mixed-effects model fit by ML
Model information:
Number of observations 30
Fixed effects coefficients 4
Random effects coefficients 6
Covariance parameters 2
Formula:
behavior ~ 1 + day*stim + (1 | rat)
Model fit statistics:
AIC BIC LogLikelihood Deviance
231.74 240.15 -109.87 219.74
Fixed effects coefficients (95% CIs):
Name Estimate SE tStat DF pValue
{'(Intercept)'} 75.867 5.1856 14.63 26 4.6141e-14
{'day' } 3.1667 1.4985 2.1132 26 0.044334
{'stim' } 12.667 7.3335 1.7272 26 0.095989
{'day:stim' } 1 2.1192 0.47188 26 0.64095
Lower Upper
65.208 86.526
0.086483 6.2469
-2.4075 27.741
-3.356 5.356
Random effects covariance parameters (95% CIs):
Group: rat (6 Levels)
Name1 Name2 Type Estimate
{'(Intercept)'} {'(Intercept)'} {'std'} 6.3444
Lower Upper
2.9639 13.581
Group: Error
Name Estimate Lower Upper
{'Res Std'} 8.2076 6.1852 10.891
effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
----------------------------------------------------------------------------
stim x day (interaction) t(26)= 0.47 F(1)= 0.223 p=0.6409 p=0.6413 (df=24)
day (learning) t(26)= 2.11 F(1)= 4.466 p=0.04433 p=0.04517 (df=24)
stim (main, window start) t(26)= 1.73 F(1)= 2.983 p=0.09599 p=0.1083 (df=13)
interaction 95% CI: [-3.356, +5.356]
HONEST LME (per-animal random slope, day|rat): interaction F(1,6.0)=0.18, p=0.6872
(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
model above is the honest learning-rate test -- DF collapses toward the animal count.)
INTERPRETATION: stim x day interaction n.s. -- slopes parallel (no differential learning rate) (p=0.6409, slope diff=+1)
Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.