analysis(matlab): rate + count outputs, variation batch 5
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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==============================================================================
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VARIATION: unmerge_d6_10 [metric: success RATE (success/attempts)]
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==============================================================================
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model: behavior ~ stim + day + stim:day + (1|rat) (behavior = success RATE (success/attempts))
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day = training day within window (0 = first analyzed day)
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treatment (stim=1): Electrode-Box-B2
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control (stim=0): Electrode-Box-A2
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N = 5 rats, 25 sessions raw day coverage: treat 6..10, control 6..10
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(equal day coverage over this window)
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==============================================================================
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FULL MODEL SUMMARY -- fitlme
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==============================================================================
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Linear mixed-effects model fit by ML
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Model information:
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Number of observations 25
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Fixed effects coefficients 4
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Random effects coefficients 5
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Covariance parameters 2
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Formula:
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behavior ~ 1 + day*stim + (1 | rat)
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Model fit statistics:
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AIC BIC LogLikelihood Deviance
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-55.071 -47.758 33.535 -67.071
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Fixed effects coefficients (95% CIs):
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Name Estimate SE tStat DF pValue
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{'(Intercept)'} 0.52619 0.041587 12.653 21 2.7251e-11
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{'day' } 0.0099391 0.012456 0.79797 21 0.43382
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{'stim' } 0.11742 0.053689 2.187 21 0.040203
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{'day:stim' } 0.0022606 0.01608 0.14058 21 0.88954
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Lower Upper
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0.4397 0.61267
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-0.015964 0.035842
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0.0057634 0.22907
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-0.03118 0.035701
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Random effects covariance parameters (95% CIs):
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Group: rat (5 Levels)
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Name1 Name2 Type Estimate
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{'(Intercept)'} {'(Intercept)'} {'std'} 0.039966
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Lower Upper
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0.016761 0.095298
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Group: Error
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Name Estimate Lower Upper
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{'Res Std'} 0.055703 0.040859 0.075939
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effect t(df) / F(df1) p (resid) Satterthwaite: p (df)
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----------------------------------------------------------------------------
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stim x day (interaction) t(21)= 0.14 F(1)= 0.020 p=0.8895 p=0.8896 (df=20)
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day (learning) t(21)= 0.80 F(1)= 0.637 p=0.4338 p=0.4343 (df=20)
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stim (main, window start) t(21)= 2.19 F(1)= 4.783 p=0.0402 p=0.05066 (df=11)
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interaction 95% CI: [-0.03118, +0.0357]
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HONEST LME (per-animal random slope, day|rat): interaction F(1,5.0)=0.01, p=0.9219
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(Satterthwaite DF ~= residual on this random-intercept model; the random-slope
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model above is the honest learning-rate test -- DF collapses toward the animal count.)
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INTERPRETATION: stim x day interaction n.s. -- slopes parallel (no differential learning rate) (p=0.8895, slope diff=+0.002261)
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Paper (N=24, count): interaction t(227)=2.68, F(1)=7.12, p=0.008.
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