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analysis(matlab): Box-A pooling variations (b2 vs a2+a, b2+a vs a2)

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Add make_boxa_variations.m producing 6 variation folders (data.csv + analyze.m
+ result.txt) for the paper LME over windows 0-5, 6-10, 0-10:
  boxa_a2  B2         vs A2 + Box-A   (b2 vs a2+a)
  boxa_b2  B2 + Box-A vs A2           (b2+a vs a2)
plus variations/boxa_summary.csv (residual / Satterthwaite / random-slope
interaction p). Early window (0-5) is obs-level significant (res p~0.03-0.04)
but n.s. under the honest random-slope test (rs p~0.13); later windows n.s.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
This commit is contained in:
Experiments DB Dev
2026-07-23 13:39:01 -04:00
parent b03549982e
commit e1af1af7f4
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analysis/matlab/variations/boxa_a2_d0_10/data.csv
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subject,group,day,success,total,stim
Banh-mi-1,Electrode-Box-B2,0,13,84,1
Banh-mi-1,Electrode-Box-B2,1,35,86,1
Banh-mi-1,Electrode-Box-B2,2,47,110,1
Banh-mi-1,Electrode-Box-B2,3,65,140,1
Banh-mi-1,Electrode-Box-B2,4,70,127,1
Banh-mi-1,Electrode-Box-B2,5,102,142,1
Banh-mi-1,Electrode-Box-B2,6,90,131,1
Banh-mi-1,Electrode-Box-B2,7,109,148,1
Banh-mi-1,Electrode-Box-B2,8,104,137,1
Banh-mi-1,Electrode-Box-B2,9,119,150,1
Banh-mi-1,Electrode-Box-B2,10,121,158,1
Banh-mi-2,Electrode-Box-A2,0,25,97,0
Banh-mi-2,Electrode-Box-A2,1,22,101,0
Banh-mi-2,Electrode-Box-A2,2,22,119,0
Banh-mi-2,Electrode-Box-A2,3,29,118,0
Banh-mi-2,Electrode-Box-A2,4,27,136,0
Banh-mi-2,Electrode-Box-A2,5,43,146,0
Banh-mi-2,Electrode-Box-A2,6,74,146,0
Banh-mi-2,Electrode-Box-A2,7,70,148,0
Banh-mi-2,Electrode-Box-A2,8,65,130,0
Banh-mi-2,Electrode-Box-A2,9,79,151,0
Banh-mi-2,Electrode-Box-A2,10,93,152,0
Egg-tart-1,Electrode-Box-B2,0,7,56,1
Egg-tart-1,Electrode-Box-B2,1,16,78,1
Egg-tart-1,Electrode-Box-B2,2,23,103,1
Egg-tart-1,Electrode-Box-B2,3,63,120,1
Egg-tart-1,Electrode-Box-B2,4,69,132,1
Egg-tart-1,Electrode-Box-B2,5,83,136,1
Egg-tart-1,Electrode-Box-B2,6,71,142,1
Egg-tart-1,Electrode-Box-B2,7,79,138,1
Egg-tart-1,Electrode-Box-B2,8,98,142,1
Egg-tart-1,Electrode-Box-B2,9,89,139,1
Egg-tart-1,Electrode-Box-B2,10,96,143,1
Egg-tart-2,Electrode-Box-A2,0,9,32,0
Egg-tart-2,Electrode-Box-A2,1,2,38,0
Egg-tart-2,Electrode-Box-A2,2,31,93,0
Egg-tart-2,Electrode-Box-A2,3,44,101,0
Egg-tart-2,Electrode-Box-A2,4,54,131,0
Egg-tart-2,Electrode-Box-A2,5,84,139,0
Egg-tart-2,Electrode-Box-A2,6,85,145,0
Egg-tart-2,Electrode-Box-A2,7,79,143,0
Egg-tart-2,Electrode-Box-A2,8,76,131,0
Egg-tart-2,Electrode-Box-A2,9,88,149,0
Egg-tart-2,Electrode-Box-A2,10,81,151,0
Khoai-tay-1,Electrode-Box-A,0,14,62,0
Khoai-tay-1,Electrode-Box-A,1,22,83,0
Khoai-tay-1,Electrode-Box-A,2,6,79,0
Khoai-tay-1,Electrode-Box-A,3,28,97,0
Khoai-tay-1,Electrode-Box-A,4,60,134,0
Khoai-tay-1,Electrode-Box-A,5,75,138,0
Khoai-tay-1,Electrode-Box-A,6,81,137,0
Khoai-tay-1,Electrode-Box-A,7,78,147,0
Khoai-tay-1,Electrode-Box-A,8,91,132,0
Khoai-tay-1,Electrode-Box-A,9,99,146,0
Khoai-tay-1,Electrode-Box-A,10,94,143,0
Root-beer-1,Electrode-Box-B2,0,11,85,1
Root-beer-1,Electrode-Box-B2,1,18,76,1
Root-beer-1,Electrode-Box-B2,2,40,105,1
Root-beer-1,Electrode-Box-B2,3,55,134,1
Root-beer-1,Electrode-Box-B2,4,75,136,1
Root-beer-1,Electrode-Box-B2,5,64,133,1
Root-beer-1,Electrode-Box-B2,6,104,139,1
Root-beer-1,Electrode-Box-B2,7,98,148,1
Root-beer-1,Electrode-Box-B2,8,81,145,1
Root-beer-1,Electrode-Box-B2,9,89,156,1
Root-beer-1,Electrode-Box-B2,10,105,158,1
Root-beer-2,Electrode-Box-A2,0,22,74,0
Root-beer-2,Electrode-Box-A2,1,31,87,0
Root-beer-2,Electrode-Box-A2,2,49,134,0
Root-beer-2,Electrode-Box-A2,3,31,89,0
Root-beer-2,Electrode-Box-A2,4,60,140,0
Root-beer-2,Electrode-Box-A2,5,84,147,0
1 subject group day success total stim
2 Banh-mi-1 Electrode-Box-B2 0 13 84 1
3 Banh-mi-1 Electrode-Box-B2 1 35 86 1
4 Banh-mi-1 Electrode-Box-B2 2 47 110 1
5 Banh-mi-1 Electrode-Box-B2 3 65 140 1
6 Banh-mi-1 Electrode-Box-B2 4 70 127 1
7 Banh-mi-1 Electrode-Box-B2 5 102 142 1
8 Banh-mi-1 Electrode-Box-B2 6 90 131 1
9 Banh-mi-1 Electrode-Box-B2 7 109 148 1
10 Banh-mi-1 Electrode-Box-B2 8 104 137 1
11 Banh-mi-1 Electrode-Box-B2 9 119 150 1
12 Banh-mi-1 Electrode-Box-B2 10 121 158 1
13 Banh-mi-2 Electrode-Box-A2 0 25 97 0
14 Banh-mi-2 Electrode-Box-A2 1 22 101 0
15 Banh-mi-2 Electrode-Box-A2 2 22 119 0
16 Banh-mi-2 Electrode-Box-A2 3 29 118 0
17 Banh-mi-2 Electrode-Box-A2 4 27 136 0
18 Banh-mi-2 Electrode-Box-A2 5 43 146 0
19 Banh-mi-2 Electrode-Box-A2 6 74 146 0
20 Banh-mi-2 Electrode-Box-A2 7 70 148 0
21 Banh-mi-2 Electrode-Box-A2 8 65 130 0
22 Banh-mi-2 Electrode-Box-A2 9 79 151 0
23 Banh-mi-2 Electrode-Box-A2 10 93 152 0
24 Egg-tart-1 Electrode-Box-B2 0 7 56 1
25 Egg-tart-1 Electrode-Box-B2 1 16 78 1
26 Egg-tart-1 Electrode-Box-B2 2 23 103 1
27 Egg-tart-1 Electrode-Box-B2 3 63 120 1
28 Egg-tart-1 Electrode-Box-B2 4 69 132 1
29 Egg-tart-1 Electrode-Box-B2 5 83 136 1
30 Egg-tart-1 Electrode-Box-B2 6 71 142 1
31 Egg-tart-1 Electrode-Box-B2 7 79 138 1
32 Egg-tart-1 Electrode-Box-B2 8 98 142 1
33 Egg-tart-1 Electrode-Box-B2 9 89 139 1
34 Egg-tart-1 Electrode-Box-B2 10 96 143 1
35 Egg-tart-2 Electrode-Box-A2 0 9 32 0
36 Egg-tart-2 Electrode-Box-A2 1 2 38 0
37 Egg-tart-2 Electrode-Box-A2 2 31 93 0
38 Egg-tart-2 Electrode-Box-A2 3 44 101 0
39 Egg-tart-2 Electrode-Box-A2 4 54 131 0
40 Egg-tart-2 Electrode-Box-A2 5 84 139 0
41 Egg-tart-2 Electrode-Box-A2 6 85 145 0
42 Egg-tart-2 Electrode-Box-A2 7 79 143 0
43 Egg-tart-2 Electrode-Box-A2 8 76 131 0
44 Egg-tart-2 Electrode-Box-A2 9 88 149 0
45 Egg-tart-2 Electrode-Box-A2 10 81 151 0
46 Khoai-tay-1 Electrode-Box-A 0 14 62 0
47 Khoai-tay-1 Electrode-Box-A 1 22 83 0
48 Khoai-tay-1 Electrode-Box-A 2 6 79 0
49 Khoai-tay-1 Electrode-Box-A 3 28 97 0
50 Khoai-tay-1 Electrode-Box-A 4 60 134 0
51 Khoai-tay-1 Electrode-Box-A 5 75 138 0
52 Khoai-tay-1 Electrode-Box-A 6 81 137 0
53 Khoai-tay-1 Electrode-Box-A 7 78 147 0
54 Khoai-tay-1 Electrode-Box-A 8 91 132 0
55 Khoai-tay-1 Electrode-Box-A 9 99 146 0
56 Khoai-tay-1 Electrode-Box-A 10 94 143 0
57 Root-beer-1 Electrode-Box-B2 0 11 85 1
58 Root-beer-1 Electrode-Box-B2 1 18 76 1
59 Root-beer-1 Electrode-Box-B2 2 40 105 1
60 Root-beer-1 Electrode-Box-B2 3 55 134 1
61 Root-beer-1 Electrode-Box-B2 4 75 136 1
62 Root-beer-1 Electrode-Box-B2 5 64 133 1
63 Root-beer-1 Electrode-Box-B2 6 104 139 1
64 Root-beer-1 Electrode-Box-B2 7 98 148 1
65 Root-beer-1 Electrode-Box-B2 8 81 145 1
66 Root-beer-1 Electrode-Box-B2 9 89 156 1
67 Root-beer-1 Electrode-Box-B2 10 105 158 1
68 Root-beer-2 Electrode-Box-A2 0 22 74 0
69 Root-beer-2 Electrode-Box-A2 1 31 87 0
70 Root-beer-2 Electrode-Box-A2 2 49 134 0
71 Root-beer-2 Electrode-Box-A2 3 31 89 0
72 Root-beer-2 Electrode-Box-A2 4 60 140 0
73 Root-beer-2 Electrode-Box-A2 5 84 147 0