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analysis(matlab): rate + count outputs, variation batch 4

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Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Experiments DB Dev
2026-07-24 02:32:53 -04:00
parent 0e16690c8f
commit 1606eb698b
72 changed files with 1869 additions and 891 deletions
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analysis/matlab/variations/right_only_d0_5/power_result.txt
+6 -7
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@@ -1,11 +1,11 @@
==============================================================================
POWER SIMULATION -- right_only_d0_5
POWER SIMULATION -- right_only_d0_5 [metric: # successes (count)]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (success COUNT; day within-window)
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = # successes (count); day within-window)
observed groups: stim n=4, control n=3 nrep=120, alpha=0.05
ground truth: stim:day=+5.31/day, rat SD=5.25, residual SD=9.96, days=6
ground truth: stim:day=+5.307/day, rat SD=5.248, residual SD=9.964, days=6
true stim:day interaction = +5.31 (100% of observed)
true stim:day interaction = +5.307 (100% of observed)
N/group | per-animal power | LME power
------------------------------------------
3 | 0.38 | 0.80 <- observed
@@ -15,7 +15,7 @@ ground truth: stim:day=+5.31/day, rat SD=5.25, residual SD=9.96, days=6
16 | 1.00 | 1.00
24 | 1.00 | 1.00
true stim:day interaction = +2.65 (50% of observed)
true stim:day interaction = +2.654 (50% of observed)
N/group | per-animal power | LME power
------------------------------------------
3 | 0.11 | 0.28 <- observed
@@ -25,5 +25,4 @@ ground truth: stim:day=+5.31/day, rat SD=5.25, residual SD=9.96, days=6
16 | 0.83 | 0.85
24 | 0.95 | 0.97
Read the per-animal column as the honest power. At the observed N this study
is typically underpowered; per-animal power reaches ~0.8 only at larger N.
Read the per-animal column as the honest power; LME is optimistic (obs-level DF).