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analysis(matlab): rate + count outputs, variation batch 3

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Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Experiments DB Dev
2026-07-24 02:32:52 -04:00
parent 6ba21a1a35
commit 0e16690c8f
72 changed files with 1875 additions and 897 deletions
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analysis/matlab/variations/prev_f_full/power_result.txt
+6 -7
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@@ -1,11 +1,11 @@
==============================================================================
POWER SIMULATION -- prev_f_full
POWER SIMULATION -- prev_f_full [metric: # successes (count)]
==============================================================================
model: behavior ~ stim + day + stim:day + (1|rat) (success COUNT; day within-window)
model: behavior ~ stim + day + stim:day + (1|rat) (behavior = # successes (count); day within-window)
observed groups: stim n=12, control n=12 nrep=120, alpha=0.05
ground truth: stim:day=+0.56/day, rat SD=4.32, residual SD=4.49, days=10
ground truth: stim:day=+0.5602/day, rat SD=4.316, residual SD=4.489, days=10
true stim:day interaction = +0.56 (100% of observed)
true stim:day interaction = +0.5602 (100% of observed)
N/group | per-animal power | LME power
------------------------------------------
3 | 0.13 | 0.27
@@ -15,7 +15,7 @@ ground truth: stim:day=+0.56/day, rat SD=4.32, residual SD=4.49, days=10
16 | 0.91 | 0.93
24 | 0.98 | 0.98
true stim:day interaction = +0.28 (50% of observed)
true stim:day interaction = +0.2801 (50% of observed)
N/group | per-animal power | LME power
------------------------------------------
3 | 0.04 | 0.07
@@ -25,5 +25,4 @@ ground truth: stim:day=+0.56/day, rat SD=4.32, residual SD=4.49, days=10
16 | 0.33 | 0.37
24 | 0.45 | 0.47
Read the per-animal column as the honest power. At the observed N this study
is typically underpowered; per-animal power reaches ~0.8 only at larger N.
Read the per-animal column as the honest power; LME is optimistic (obs-level DF).