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analysis(matlab): rate + count outputs, variation batch 3

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Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Experiments DB Dev
2026-07-24 02:32:52 -04:00
parent 6ba21a1a35
commit 0e16690c8f
72 changed files with 1875 additions and 897 deletions
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analysis/matlab/variations/naive_boxa_d6_13/logpower_result.txt
+5 -6
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@@ -1,7 +1,7 @@
==============================================================================
LOG-DAY MODEL + COHEN'S f + POWER -- naive_boxa_d6_13
LOG-DAY MODEL + COHEN'S f + POWER -- naive_boxa_d6_13 [metric: # successes (count)]
==============================================================================
model: behavior ~ stim + log(day) + stim:log(day) + (1|rat) (success COUNT)
model: behavior ~ stim + log(day) + stim:log(day) + (1|rat) (behavior = # successes (count))
log(day) uses 1-indexed training day (our day 0 = paper "Day 1")
observed groups: stim n=3, control n=7 nrep=120, alpha=0.05
@@ -10,9 +10,9 @@ stim x log(day) interaction: F(1,69)=0.239 p(resid)=0.6263 p(Satt)=0.6264 (df=
honest per-animal random slope (log-day): F(1,9.1)=0.07 p=0.8013
Cohen's f (interaction, partial eta^2=0.001) = 0.034 (small; f: .10 small, .25 medium, .40 large)
--- power simulation (log-day ground truth: stim:logday=+6.70, ratSD=10.78, resSD=11.38) ---
--- power simulation (log-day ground truth: stim:logday=+6.701, ratSD=10.78, resSD=11.38) ---
true stim:log(day) = +6.70 (100% of observed)
true stim:log(day) = +6.701 (100% of observed)
N/group | per-animal power | LME power
------------------------------------------
3 | 0.05 | 0.07 <- observed
@@ -32,5 +32,4 @@ Cohen's f (interaction, partial eta^2=0.001) = 0.034 (small; f: .10 small, .25
16 | 0.06 | 0.07
24 | 0.12 | 0.11
Read the per-animal column as the honest power; the LME column matches the
paper's power code (anova interaction p, observation-level DF) and is optimistic.
Read per-animal as the honest power; LME matches the paper's power code (optimistic).