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analysis(matlab): rate + count outputs, variation batch 1

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Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Experiments DB Dev
2026-07-24 02:32:51 -04:00
parent 1009f263e8
commit 0a438a4649
72 changed files with 1873 additions and 895 deletions
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analysis/matlab/variations/boxa_b2_d6_10/logpower_result.txt
+5 -6
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@@ -1,7 +1,7 @@
==============================================================================
LOG-DAY MODEL + COHEN'S f + POWER -- boxa_b2_d6_10
LOG-DAY MODEL + COHEN'S f + POWER -- boxa_b2_d6_10 [metric: # successes (count)]
==============================================================================
model: behavior ~ stim + log(day) + stim:log(day) + (1|rat) (success COUNT)
model: behavior ~ stim + log(day) + stim:log(day) + (1|rat) (behavior = # successes (count))
log(day) uses 1-indexed training day (our day 0 = paper "Day 1")
observed groups: stim n=4, control n=2 nrep=120, alpha=0.05
@@ -10,7 +10,7 @@ stim x log(day) interaction: F(1,26)=0.850 p(resid)=0.365 p(Satt)=0.3657 (df=2
honest per-animal random slope (log-day): F(1,6.0)=0.67 p=0.4431
Cohen's f (interaction, partial eta^2=0.014) = 0.118 (small-medium; f: .10 small, .25 medium, .40 large)
--- power simulation (log-day ground truth: stim:logday=+18.32, ratSD=6.21, resSD=8.20) ---
--- power simulation (log-day ground truth: stim:logday=+18.32, ratSD=6.212, resSD=8.198) ---
true stim:log(day) = +18.32 (100% of observed)
N/group | per-animal power | LME power
@@ -22,7 +22,7 @@ Cohen's f (interaction, partial eta^2=0.014) = 0.118 (small-medium; f: .10 smal
16 | 0.57 | 0.63
24 | 0.75 | 0.78
true stim:log(day) = +9.16 (50% of observed)
true stim:log(day) = +9.162 (50% of observed)
N/group | per-animal power | LME power
------------------------------------------
3 | 0.07 | 0.11
@@ -32,5 +32,4 @@ Cohen's f (interaction, partial eta^2=0.014) = 0.118 (small-medium; f: .10 smal
16 | 0.20 | 0.20
24 | 0.31 | 0.31
Read the per-animal column as the honest power; the LME column matches the
paper's power code (anova interaction p, observation-level DF) and is optimistic.
Read per-animal as the honest power; LME matches the paper's power code (optimistic).